Yamada, Y., Patel, N., Fukuda, H., Nagata, T., Mitarai, S., & Azam, F. (2023). Bacterial surface roughness regulates nanoparticle scavenging in seawater. Limnology and Oceanography, lno.12309.
Patel, N., Guillemette, R., Lal, R., & Azam, F. (2022). Bacterial surface interactions with organic colloidal particles: Nanoscale hotspots of organic matter in the ocean. PLOS ONE, 17(8), e0272329.
Dinasquet, J., Bigeard, E., Gazeau, F., Azam, F., Guieu, C., Maranon, E., Ridame, C., Van Wambeke, F., Obernosterer, I., & Baudoux, A. C. (2022). Impact of dust addition on the microbial food web under present and future conditions of pH and temperature. Biogeosciences, 19(4), 1303–1319.
Koester, I., Quinlan, Z. A., Nothias, L., White, M. E., Rabines, A., Petras, D., Brunson, J. K., Dührkop, K., Ludwig, M., Böcker, S., Azam, F., Allen, A. E., Dorrestein, P. C., & Aluwihare, L. I. (2022). Illuminating the dark metabolome of Pseudo‐nitzschia –microbiome associations. Environmental Microbiology, 24(11), 5408–5424.
Patel, N., Yamada, Y., & Azam, F. (2021). Bacterial nanotubes as intercellular linkages in marine assemblages. Frontiers in Marine Science, 8, 12.
Zhou, Y. Y., Guillemette, R., Malfatti, F., Zheng, T. L., Mao, X. Z., Zhu, X. S., Medina, M., & Azam, F. (2021). Ectohydrolytic enzyme activities of bacteria associated with Orbicella annularis coral. Coral Reefs, 15.
Martin, N., Bernat, T., Dinasquet, J., Stofko, A., Damon, A., Deheyn, D. D., Azam, F., Smith, J. E., Davey, M. P., Smith, A. G., Vignolini, S., & Wangpraseurt, D. (2021). Synthetic algal-bacteria consortia for space-efficient microalgal growth in a simple hydrogel system. Journal of Applied Phycology.
Jiao, N. Z., Liu, J. H., Edwards, B., Lv, Z. Q., Cai, R. H., Liu, Y. Q., Xiao, X. L., Wang, J. N., Jiao, F. L. E., Wang, R., Huang, X. Y., Guo, B. X., Sun, J., Zhang, R., Zhang, Y., Tang, K., Zheng, Q., Azam, F., Batt, J., … Legendre, L. (2021). Correcting a major error in assessing organic carbon pollution in natural waters. Science Advances, 7(16).
Wangpraseurt, D., You, S., Azam, F., Jacucci, G., Gaidarenko, O., Hildebrand, M., Kühl, M., Smith, A. G., Davey, M. P., Smith, A., Deheyn, D. D., Chen, S., & Vignolini, S. (2020). Bionic 3D printed corals. Nature Communications, 11(1), 1748.
Yamada, Y., Guillemette, R., Baudoux, A. C., Patel, N., & Azam, F. (2020). Viral attachment to biotic and abiotic surfaces in seawater. Applied and Environmental Microbiology, 86(3).
Guillemette, R., Ushijima, B., Jalan, M., Hase, C. C., & Azam, F. (2020). Insight into the resilience and susceptibility of marine bacteria to T6SS attack by Vibrio cholerae and Vibrio coralliilyticus. PLOS ONE, 15(1).
Cavicchioli, R., Ripple, W. J., Timmis, K. N., Azam, F., Bakken, L. R., Baylis, M., Behrenfeld, M. J., Boetius, A., Boyd, P. W., Classen, A. T., Crowther, T. W., Danovaro, R., Foreman, C. M., Huisman, J., Hutchins, D. A., Jansson, J. K., Karl, D. M., Koskella, B., Welch, D. B. M., … Webster, N. S. (2019). Scientists’ warning to humanity: microorganisms and climate change. Nature Reviews Microbiology, 17(9), 569–586.
Malfatti, F., Lee, C., Tinta, T., Pendergraft, M. A., Celussi, M., Zhou, Y. Y., Sultana, C. M., Rotter, A., Axson, J. L., Collins, D. B., Santander, M. V., Morales, A. L. A., Aluwihare, L. I., Riemer, N., Grassian, V. H., Azam, F., & Prather, K. A. (2019). Detection of active microbial enzymes in nascent sea spray aerosol: Implications for atmospheric chemistry and climate. Environmental Science & Technology Letters, 6(3), 171–177.
Yang, Q. Q., Ma, Q., Herum, K. M., Wang, C. H., Patel, N., Lee, J., Wang, S. S., Yen, T. M., Wang, J., Tang, H. M., Lo, Y. H., Head, B. P., Azam, F., Xu, S., Cauwenberghs, G., McCulloch, A. D., John, S., Liu, Z. W., & Lal, R. (2019). Array atomic force microscopy for real-time multiparametric analysis. Proceedings of the National Academy of Sciences of the United States of America, 116(13), 5872–5877.
Dinasquet, J., Tiirola, M., & Azam, F. (2018). Enrichment of bacterioplankton able to utilize one-carbon and methylated compounds in the coastal Pacific Ocean. Frontiers in Marine Science, 5.
Zhang, C. L., Dang, H. Y., Azam, F., Benner, R., Legendre, L., Passow, U., Polimene, L., Robinson, C., Suttle, C. A., & Jiao, N. Z. (2018). Evolving paradigms in biological carbon cycling in the ocean. National Science Review, 5(4), 481–499.
Guillemette, R., Kaneko, R., Blanton, J., Tan, J., Witt, M., Hamilton, S., Allen, E. E., Medina, M., Hamasaki, K., Koch, B. P., & Azam, F. (2018). Bacterioplankton drawdown of coral mass-spawned organic matter. The ISME Journal.
Michaud, J. M., Thompson, L. R., Kaul, D., Espinoza, J. L., Richter, R. A., Xu, Z. Z., Lee, C., Pham, K. M., Beall, C. M., Malfatti, F., Azam, F., Knight, R., Burkart, M. D., Dupont, C. L., & Prather, K. A. (2018). Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm. Nature Communications, 9.
Hagstrom, A., Azam, F., Berg, C., & Zweifel, U. L. (2018). Isolates as models to study bacterial ecophysiology and biogeochemistry. Aquatic Microbial Ecology, 80(1), 15–27.
McCluskey, C. S., Hill, T. C. J., Malfatti, F., Sultana, C. M., Lee, C., Santander, M. V., Beall, C. M., Moore, K. A., Cornwell, G. C., Collins, D. B., Prather, K. A., Jayarathne, T., Stone, E. A., Azam, F., Kreidenweis, S. M., & DeMott, P. J. (2017). A dynamic link between ice nucleating particles released in nascent sea spray aerosol and oceanic biological activity during two mesocosm experiments. Journal of the Atmospheric Sciences, 74(1), 151–166.
Paerl, R. W., Bouget, F.-Y., Lozano, J.-C., Verge, V., Schatt, P., Allen, E. E., Palenik, B., & Azam, F. (2016). Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton. Isme Journal.
Mitulla, M., Dinasquet, J., Guillemette, R., Simon, M., Azam, F., & Wietz, M. (2016). Response of bacterial communities from California coastal waters to alginate particles and an alginolytic Alteromonas macleodii strain. Environmental Microbiology, 18(12), 4369–4377.
Jayarathne, T., Sultana, C. M., Lee, C., Malfatti, F., Cox, J. L., Pendergraft, M. A., Moore, K. A., Azam, F., Tivanski, A. V., Cappa, C. D., Bertram, T. H., Grassian, V. H., Prather, K. A., & Stone, E. A. (2016). Enrichment of saccharides and divalent cations in sea spray aerosol during two phytoplankton blooms. Environmental Science & Technology, 50(21), 11511–11520.
Li, J., Azam, F., & Zhang, S. (2016). Outer membrane vesicles containing signalling molecules and active hydrolytic enzymes released by a coral pathogen Vibrio shilonii AK1. Environmental Microbiology, 18(11), 3850–3866.
Sherwood, B. P., Shaffer, E. A., Reyes, K., Longnecker, K., Aluwihare, L. I., & Azam, F. (2015). Metabolic characterization of a model heterotrophic bacterium capable of significant chemical alteration of marine dissolved organic matter. Marine Chemistry, 177, 357–365.
Lee, C., Sultana, C. M., Collins, D. B., Santander, M. V., Axson, J. L., Malfatti, F., Cornwell, G. C., Grandquist, J. R., Deane, G. B., Stokes, M. D., Azam, F., Grassian, V. H., & Prather, K. A. (2015). Advancing model systems for fundamental laboratory studies of sea spray aerosol using the microbial loop. Journal of Physical Chemistry A, 119(33), 8860–8870.
Paerl, R. W., Bertrand, E. M., Allen, A. E., Palenik, B., & Azam, F. (2015). Vitamin B1 ecophysiology of marine picoeukaryotic algae: Strain-specific differences and a new role for bacteria in vitamin cycling. Limnology and Oceanography, 60(1), 215–228.
Kim, M. J., Michaud, J. M., Williams, R., Sherwood, B. P., Pomeroy, R., Azam, F., Burkart, M., & Bertram, T. H. (2015). Bacteria-driven production of alkyl nitrates in seawater. Geophysical Research Letters, 42(2), 597–604.
Jiao, N., Robinson, C., Azam, F., Thomas, H., Baltar, F., Dang, H., Hardman-Mountford, N. J., Johnson, M., Kirchman, D. L., Koch, B. P., Legendre, L., Li, C., Liu, J., Luo, T., Luo, Y. W., Mitra, A., Romanou, A., Tang, K., Wang, X., … Zhang, R. (2014). Mechanisms of microbial carbon sequestration in the ocean - future research directions. Biogeosciences, 11(19), 5285–5306.
Thompson, A., Carter, B. J., Turk-Kubo, K., Malfatti, F., Azam, F., & Zehr, J. P. (2014). Genetic diversity of the unicellular nitrogen-fixing cyanobacteria UCYN-A and its prymnesiophyte host. Environmental Microbiology, 16(10), 3238–3249.
Smriga, S., Samo, T. J., Malfatti, F., Villareal, J., & Azam, F. (2014). Individual cell DNA synthesis within natural marine bacterial assemblages as detected by “click” chemistry. Aquatic Microbial Ecology, 72(3), 269–280.
Pedler, B. E., Aluwihare, L. I., & Azam, F. (2014). Single bacterial strain capable of significant contribution to carbon cycling in the surface ocean. Proceedings of the National Academy of Sciences of the United States of America, 111(20), 7202–7207.
Malfatti, F., Turk, V., Tinta, T., Mozetic, P., Manganelli, M., Samo, T. J., Ugalde, J. A., Kovac, N., Stefanelli, M., Antonioli, M., Fonda-Umani, S., Del Negro, P., Cataletto, B., Hozic, A., DeNardis, N. I., Zutic, V., Svetlicic, V., Radic, T. M., Radic, T., … Azam, F. (2014). Microbial mechanisms coupling carbon and phosphorus cycles in phosphorus-limited northern Adriatic Sea. Science of the Total Environment, 470, 1173–1183.
Guasco, T. L., Cuadra-Rodriguez, L. A., Pedler, B. E., Ault, A. P., Collins, D. B., Zhao, D. F., Kim, M. J., Ruppel, M. J., Wilson, S. C., Pomeroy, R. S., Grassian, V. H., Azam, F., Bertram, T. H., & Prather, K. A. (2014). Transition metal associations with primary biological particles in sea spray aerosol generated in a wave channel. Environmental Science & Technology, 48(2), 1324–1333.
Collins, D. B., Ault, A. P., Moffet, R. C., Ruppel, M. J., Cuadra-Rodriguez, L. A., Guasco, T. L., Corrigan, C. E., Pedler, B. E., Azam, F., Aluwihare, L. I., Bertram, T. H., Roberts, G. C., Grassian, V. H., & Prather, K. A. (2013). Impact of marine biogeochemistry on the chemical mixing state and cloud forming ability of nascent sea spray aerosol. Journal of Geophysical Research-Atmospheres, 118(15), 8553–8565.
Jiang, M. S., Barbeau, K. A., Selph, K. E., Measures, C. I., Buck, K. N., Azam, F., Mitchell, B. G., & Zhou, M. (2013). The role of organic ligands in iron cycling and primary productivity in the Antarctic Peninsula: A modeling study. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 90, 112–133.
Prather, K. A., Bertram, T. H., Grassian, V. H., Deane, G. B., Stokes, M. D., DeMott, P. J., Aluwihare, L. I., Palenik, B. P., Azam, F., Seinfeld, J. H., Moffet, R. C., Molina, M. J., Cappa, C. D., Geiger, F. M., Roberts, G. C., Russell, L. M., Ault, A. P., Baltrusaitis, J., Collins, D. B., … Zhao, D. F. (2013). Bringing the ocean into the laboratory to probe the chemical complexity of sea spray aerosol. Proceedings of the National Academy of Sciences of the United States of America, 110(19), 7550–7555.
Samo, T. J., Pedler, B. E., Ball, G. I., Pasulka, A. L., Taylor, A. G., Aluwihare, L. I., Azam, F., Goericke, R., & Landry, M. R. (2012). Microbial distribution and activity across a water mass frontal zone in the California Current Ecosystem. Journal of Plankton Research, 34(9), 802–814.
Baudoux, A. C., Hendrix, R. W., Lander, G. C., Bailly, X., Podell, S., Paillard, C., Johnson, J. E., Potter, C. S., Carragher, B., & Azam, F. (2012). Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses. Environmental Microbiology, 14(8), 2071–2086.
Garren, M., & Azam, F. (2012). Corals shed bacteria as a potential mechanism of resilience to organic matter enrichment. Isme Journal, 6(6), 1159–1165.
Garren, M., & Azam, F. (2012). New directions in coral reef microbial ecology. Environmental Microbiology, 14(4), 833–844.
Lander, G. C., Baudoux, A. C., Azam, F., Potter, C. S., Carragher, B., & Johnson, J. E. (2012). Capsomer dynamics and stabilization in the T=12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM. Structure, 20(3), 498–503.
Eloe, E. A., Malfatti, F., Gutierrez, J., Hardy, K., Schmidt, W. E., Pogliano, K., Pogliano, J., Azam, F., & Bartlett, D. H. (2011). Isolation and characterization of a psychropiezophilic alphaproteobacterium. Applied and Environmental Microbiology, 77(22), 8145–8153.
Beardsley, C., Moss, S., Malfatti, F., & Azam, F. (2011). Quantitative role of shrimp fecal bacteria in organic matter fluxes in a recirculating shrimp aquaculture system. FEMS Microbiology Ecology, 77(1), 134–145.
Jiao, N. Z., Herndl, G. J., Hansell, D. A., Benner, R., Kattner, G., Wilhelm, S. W., Kirchman, D. L., Weinbauer, M. G., Luo, T. W., Chen, F., & Azam, F. (2011). The microbial carbon pump and the oceanic recalcitrant dissolved organic matter pool. Nature Reviews Microbiology, 9(7).
Uitz, J., Stramski, D., Baudoux, A. C., Reynolds, R. A., Wright, V. M., Dubranna, J., & Azam, F. (2010). Variations in the optical properties of a particle suspension associated with viral infection of marine bacteria. Limnology and Oceanography, 55(6), 2317–2330.
Garren, M., & Azam, F. (2010). New method for counting bacteria associated with coral mucus. Applied and Environmental Microbiology, 76(18), 6128–6133.
Jiao, N., Herndl, G. J., Hansell, D. A., Benner, R., Kattner, G., Wilhelm, S. W., Kirchman, D. L., Weinbauer, M. G., Luo, T. W., Chen, F., & Azam, F. (2010). Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean. Nature Reviews Microbiology, 8(8), 593–599.
Smriga, S., Sandin, S. A., & Azam, F. (2010). Abundance, diversity, and activity of microbial assemblages associated with coral reef fish guts and feces. FEMS Microbiology Ecology, 73(1), 31–42.
Malfatti, F., Samo, T. J., & Azam, F. (2010). High-resolution imaging of pelagic bacteria by Atomic Force Microscopy and implications for carbon cycling. Isme Journal, 4(3), 427–439.